STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2298Hypothetical protein; KEGG: gvi:glr4076 putative transposase. (136 aa)    
Predicted Functional Partners:
Tery_3203
Transposase; KEGG: ana:alr0019 transposase.
  
     0.764
Tery_3065
Conserved hypothetical protein; KEGG: eba:ebA246.
  
     0.747
Tery_4269
KEGG: syn:sll0431 putative transposase gene of IS630 family insertion sequence ISY100h.
  
     0.736
Tery_4854
Hypothetical protein; KEGG: syn:slr1283 putative transposase gene of IS630 family insertion sequence ISY508b.
  
     0.736
Tery_3093
Conserved hypothetical protein; KEGG: eba:ebA246.
  
     0.590
Tery_4857
Hypothetical protein; KEGG: eba:ebA246 putative transposase, fragment.
  
     0.589
Tery_2299
KEGG: gvi:glr4075 putative transposase.
      0.577
Tery_2300
Hypothetical protein; KEGG: lma:LmjF09.1220 AAA family ATPase, putative.
       0.415
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.