STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2314PFAM: alpha/beta hydrolase fold; KEGG: ava:Ava_4415 alpha/beta hydrolase fold. (270 aa)    
Predicted Functional Partners:
Tery_0604
PFAM: alpha/beta hydrolase fold; KEGG: ana:alr3685 similar to esterase.
  
     0.742
Tery_0351
PFAM: alpha/beta hydrolase fold; KEGG: ava:Ava_1799 alpha/beta hydrolase fold.
  
     0.730
Tery_3819
PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like Methyltransferase type 11 Methyltransferase type 12; KEGG: ana:alr2680 polyketide synthase.
  
 
 0.721
menH
Alpha/beta hydrolase fold; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC); Belongs to the AB hydrolase superfamily. MenH family.
  
     0.659
Tery_2242
PFAM: alpha/beta hydrolase fold; KEGG: ava:Ava_3102 alpha/beta hydrolase fold.
  
     0.637
Tery_2944
PFAM: alpha/beta hydrolase fold; KEGG: ana:all2761 hypothetical protein.
  
     0.634
Tery_3023
PFAM: alpha/beta hydrolase fold; KEGG: ana:all0316 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase.
  
     0.590
Tery_0931
PFAM: alpha/beta hydrolase fold; KEGG: ana:alr4625 hypothetical protein.
  
     0.580
Tery_2109
PFAM: AMP-dependent synthetase and ligase Thioesterase phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
   
 
 0.576
Tery_3821
PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding; KEGG: ava:Ava_3986 short-chain dehydrogenase/reductase SDR.
  
 
 0.551
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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