STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2367KEGG: ava:Ava_1104 hypothetical protein. (254 aa)    
Predicted Functional Partners:
Tery_1917
PFAM: von Willebrand factor, type A; KEGG: ava:Ava_B0132 serine/threonine protein kinase with WD40 repeats.
 
  
 0.840
Tery_2368
PFAM: von Willebrand factor, type A; KEGG: ava:Ava_1103 von Willebrand factor, type A.
 
    0.834
Tery_2828
Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like; KEGG: ana:alr2824 hypothetical protein.
 
   
 0.788
Tery_1531
Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A.
  
     0.753
Tery_0744
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.751
Tery_1507
KEGG: ava:Ava_0551 hypothetical protein.
  
    0.602
Tery_1933
Conserved hypothetical protein; KEGG: ana:all4916 unknown protein.
  
     0.564
Tery_0595
KEGG: ava:Ava_0514 hypothetical protein.
  
     0.561
Tery_1341
KEGG: mlo:mlr7554 hypothetical protein.
  
     0.558
Tery_0345
KEGG: ava:Ava_3131 hypothetical protein.
  
     0.541
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.