STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2380PFAM: GTP-binding protein, HSR1-related; KEGG: ava:Ava_2089 small GTP-binding protein domain. (635 aa)    
Predicted Functional Partners:
Tery_2372
KEGG: ana:all3530 hypothetical protein.
 
     0.783
Tery_3788
KEGG: ava:Ava_2786 hypothetical protein.
  
     0.764
Tery_1066
KEGG: syn:slr0554 hypothetical protein.
  
     0.702
Tery_2343
KEGG: ava:Ava_1169 hypothetical protein.
  
     0.681
Tery_2565
KEGG: ana:alr2570 hypothetical protein.
  
     0.679
Tery_1686
KEGG: ana:alr1356 hypothetical protein.
  
     0.662
Tery_1794
KEGG: ana:all1355 hypothetical protein.
  
     0.662
Tery_3519
KEGG: ana:alr1959 hypothetical protein.
  
     0.632
Tery_4193
KEGG: ava:Ava_1181 hypothetical protein.
  
     0.610
Tery_2012
KEGG: ava:Ava_3611 peptidase C14, caspase catalytic subunit P20.
  
     0.603
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.