STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2518O-methyltransferase-like; KEGG: wsu:WS2183 hypothetical protein. (256 aa)    
Predicted Functional Partners:
Tery_2517
KEGG: ava:Ava_3228 3-beta hydroxysteroid dehydrogenase/isomerase.
  
    0.582
Tery_2721
KEGG: nwi:Nwi_2459 hypothetical protein.
  
     0.487
Tery_4496
Hypothetical protein; KEGG: cac:CAC1687 collagenase family protease.
  
  
 0.415
Tery_4499
PFAM: peptidase U32; KEGG: fnu:FN1826 protease.
  
  
 0.415
comB
PFAM: 2-phosphosulfolactate phosphatase; KEGG: ava:Ava_0497 2-phosphosulfolactate phosphatas; Belongs to the ComB family.
  
     0.408
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.