Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tery_2575PFAM: protein of unknown function DUF1486; KEGG: ava:Ava_2708 pathogenesis related protein-like. (226 aa)    
Predicted Functional Partners:
Tery_3364
KEGG: ana:alr0691 hypothetical protein.
  
     0.649
Tery_0611
KEGG: ana:all5169 hypothetical protein.
  
     0.612
Tery_1855
PFAM: amidohydrolase 2; KEGG: ath:At3g53180 glutamine synthetase, putative.
  
     0.607
ndhN
NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.581
Tery_2431
KEGG: ana:asr2994 hypothetical protein.
  
     0.554
Tery_1164
KEGG: ana:asr0654 hypothetical protein.
  
     0.541
Tery_0790
PFAM: NHL repeat; KEGG: ava:Ava_4601 NHL repeat.
  
     0.536
Tery_1720
KEGG: gvi:gll4095 hypothetical protein.
  
     0.526
Tery_0288
PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: syf:Synpcc7942_1408 membrane-associated protein.
  
     0.504
Tery_2452
PFAM: isochorismatase hydrolase; KEGG: ath:At2g22570 isochorismatase hydrolase family protein.
  
     0.502
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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