STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2734PfkB; PFAM: PfkB; KEGG: ava:Ava_2919 PfkB. (327 aa)    
Predicted Functional Partners:
Tery_4624
Alpha-glucosidase; PFAM: glycoside hydrolase, family 31; KEGG: lac:LBA1812 alpha-glucosidase II; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.927
Tery_2627
PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ava:Ava_4629 6-phosphogluconolactonase.
 
 
 0.918
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: ava:Ava_3708 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.916
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.908
fbp
PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: ava:Ava_1680 fructose-1,6-bisphosphatase.
     
 0.904
Tery_0948
D-fructose 1,6-bisphosphatase / sedoheptulose 1,7-bisphosphatase; Catalyzes the hydrolysis of fructose 1,6-bisphosphate (Fru 1,6-P2) and sedoheptulose 1,7-bisphosphate (Sed 1,7-P2) to fructose 6- phosphate and sedoheptulose 7-phosphate, respectively; Belongs to the FBPase class 2 family.
    
 0.904
Tery_0471
PFAM: mannose-6-phosphate isomerase, type II Cupin 2, conserved barrel; KEGG: syn:slr0493 putative mannose-1-phosphate guanylyltransferase.
     
 0.901
Tery_4760
PFAM: mannose-6-phosphate isomerase, type II Cupin 2, conserved barrel; KEGG: syn:slr2074 putative mannose-1-phosphate guanylyltransferase.
     
 0.901
Tery_0468
Hypothetical protein.
     
  0.900
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: ana:all4506 phosphorybosilformimino-5-amino-phosphorybosil-4 -imidazolecarboxamideisomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis.
  
    0.598
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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