STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2810Hypothetical protein; KEGG: ava:Ava_1356 NB-ARC. (482 aa)    
Predicted Functional Partners:
Tery_1432
PFAM: purine and other phosphorylases, family 1; KEGG: nfa:nfa44190 hypothetical protein.
 
     0.902
Tery_0709
Conserved hypothetical protein; KEGG: ana:alr7126 unknown protein.
  
     0.736
Tery_2811
PFAM: TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Sel1-like Tetratricopeptide region; KEGG: cch:Cag_1504 TPR repeat.
     0.701
Tery_3205
Hypothetical protein.
  
     0.678
Tery_4219
KEGG: ava:Ava_3525 heterocyst differentiation protein.
  
     0.671
Tery_0929
PFAM: PBS lyase HEAT-like repeat; KEGG: ava:Ava_2039 hypothetical protein.
  
     0.666
Tery_4353
KEGG: syf:Synpcc7942_1732 hypothetical protein.
  
     0.662
Tery_0269
PFAM: protein of unknown function DUF6, transmembrane; KEGG: ana:alr2338 hypothetical protein.
  
     0.636
Tery_4958
PFAM: TPR repeat; SMART: Sel1-like Tetratricopeptide region; KEGG: ana:alr0963 unknown protein.
  
     0.632
Tery_4959
PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: ana:alr0963 unknown protein.
  
     0.617
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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