STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2893Beta-glucosidase; KEGG: syn:sll1538 beta-glucosidase. (40 aa)    
Predicted Functional Partners:
Tery_2373
KEGG: ava:Ava_2529 hypothetical protein.
  
     0.714
Tery_2343
KEGG: ava:Ava_1169 hypothetical protein.
  
     0.589
Tery_1002
KEGG: ava:Ava_4316 hypothetical protein.
  
     0.557
Tery_3803
KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer phosphorylation.
  
     0.526
Tery_2273
PFAM: OstA-like protein; KEGG: syn:slr0250 hypothetical protein.
  
     0.469
Tery_4670
KEGG: ana:all5153 hypothetical protein.
  
     0.450
Tery_3051
KEGG: ana:alr4017 hypothetical protein.
  
     0.439
Tery_3215
KEGG: ana:all2716 hypothetical protein.
  
     0.431
Tery_1351
Chromosome segregation ATPase-like protein; KEGG: syn:sll1181 HlyD family secretion protein.
  
     0.428
Tery_1686
KEGG: ana:alr1356 hypothetical protein.
  
     0.424
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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