STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3147PFAM: von Willebrand factor, type A; KEGG: syn:sll0103 hypothetical protein. (420 aa)    
Predicted Functional Partners:
Tery_3145
Protein serine/threonine phosphatases; PFAM: protein phosphatase 2C-like; KEGG: tel:tlr2243 protein serin-threonin phosphatase.
       0.647
Tery_3146
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: tel:tll1329 ABC transporter ATP-binding protein.
       0.645
Tery_3148
PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: SH3-like region Tetratricopeptide region; KEGG: mth:MTH72 O-linked GlcNAc transferase.
       0.570
Tery_5042
KEGG: syn:slr0574 cytochrome P450.
  
     0.498
Tery_3332
PFAM: von Willebrand factor, type A; KEGG: ava:Ava_A0006 von Willebrand factor, type A.
 
    0.487
Tery_1403
PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: ava:Ava_2580 TPR repeat.
  
     0.454
Tery_3150
PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: bsu:BG13391 protein kinase.
  
    0.452
Tery_4936
PFAM: Protein-arginine deiminase-like; KEGG: cfa:606921 similar to Protein-arginine deiminase type IV (Peptidylarginine deiminase IV) (HL-60 PAD).
  
     0.443
Tery_3149
Hypothetical protein.
       0.433
Tery_4014
Hypothetical protein; KEGG: mmu:15930 indoleamine-pyrrole 2,3 dioxygenase.
  
     0.416
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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