STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3205Hypothetical protein. (606 aa)    
Predicted Functional Partners:
Tery_2810
Hypothetical protein; KEGG: ava:Ava_1356 NB-ARC.
  
     0.678
Tery_1672
KEGG: syn:slr0386 hypothetical protein.
  
     0.619
Tery_1933
Conserved hypothetical protein; KEGG: ana:all4916 unknown protein.
  
     0.610
Tery_0425
TIGRFAM: Protein splicing (intein) site; SMART: Hedgehog/intein hint domain-like Hedgehog/intein hint-like; KEGG: ana:all4035 unknown protein.
  
     0.564
Tery_3206
PFAM: WD-40 repeat; SMART: Pyrrolo-quinoline quinone; KEGG: ava:Ava_1556 WD-40 repeat.
     0.549
Tery_3677
PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: ana:alr0963 unknown protein.
  
     0.525
Tery_1675
KEGG: syn:slr0386 hypothetical protein.
  
     0.514
Tery_4299
KEGG: pha:PSHAa0580 hypothetical protein; membrane protein.
  
     0.504
Tery_4959
PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: ana:alr0963 unknown protein.
  
     0.499
Tery_2153
KEGG: ath:At3g25805 expressed protein.
  
     0.498
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.