STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3249Response regulator receiver protein; Controls heterocyst pattern formation. (405 aa)    
Predicted Functional Partners:
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
 
 
 0.999
Tery_3244
Putative CheA signal transduction histidine kinases; PFAM: response regulator receiveR CheW-like protein ATP-binding region, ATPase-like Signal transducing histidine kinase, homodimeric; KEGG: ava:Ava_0505 CheA signal transduction histidine kinases (STHK).
 
0.961
Tery_3247
PFAM: CheW-like protein; KEGG: ana:all0928 chemotaxis protein.
 
  
 0.934
Tery_4154
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ana:all0638 two-component hybrid sensor and regulator.
 
 
 0.924
Tery_3246
PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: ava:Ava_0506 chemotaxis sensory transducer.
 
 
 0.923
Tery_4980
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiveR PAS fold-3 PAS fold; SMART: PAS.
  
 
 0.918
Tery_0665
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:alr3170 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
  
 
 0.880
Tery_3802
Histidine kinase; PFAM: response regulator receiveR ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:all2883 two-component sensor histidine kinase.
 
  
 0.807
Tery_0717
PFAM: response regulator receiver; KEGG: ana:all2164 two-component system, regulatory protein.
  
    0.750
Tery_2216
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ana:alr4105 two-component sensor histidine kinase.
  
 
 0.721
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.