STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3356KEGG: ava:Ava_0863 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Tery_1554
Conserved hypothetical protein; KEGG: ana:all0298 unknown protein.
  
     0.770
Tery_0732
KEGG: ava:Ava_4801 hypothetical protein.
  
     0.759
Tery_1469
Conserved hypothetical protein; KEGG: ana:all0311 unknown protein.
  
     0.753
Tery_2309
KEGG: ava:Ava_4409 hypothetical protein.
  
     0.736
Tery_2217
KEGG: ava:Ava_4915 hypothetical protein.
  
     0.710
Tery_1762
KEGG: ana:alr3524 hypothetical protein.
  
     0.697
Tery_2185
Conserved hypothetical protein; KEGG: ana:all3542 unknown protein.
  
     0.696
Tery_4315
PFAM: Saccharopine dehydrogenase; KEGG: ana:alr1138 hypothetical protein.
  
     0.695
Tery_4300
KEGG: gvi:gsr4132 hypothetical protein.
  
     0.692
Tery_2581
KEGG: ava:Ava_2650 hypothetical protein.
  
     0.676
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.