STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3437TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ava:Ava_3763 thioredoxin; Belongs to the thioredoxin family. (107 aa)    
Predicted Functional Partners:
Tery_0466
PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: ava:Ava_1294 glutamine amidotransferase, class-II.
    
 
 0.797
Tery_0162
Redoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 
 0.781
Tery_5038
1-Cys peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: ava:Ava_1358 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.759
Tery_1699
Thioredoxin-disulfide reductase; PFAM: glucose-inhibited division protein A HI0933-like protein FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmt:PMT1551 putative thioredoxin reductase.
  
 
 0.743
Tery_1504
PFAM: Thioredoxin domain; KEGG: ava:Ava_0338 thioredoxin-related.
 
  
 0.717
Tery_3849
Carbonate dehydratase; PFAM: ribulose bisphosphate carboxylase, small chain transferase hexapeptide repeat; KEGG: gvi:gll2093 carbon dioxide concentrating mechanism protein.
    
   0.651
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
  
 
 0.446
Tery_0235
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: ava:Ava_2024 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.420
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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