STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3616PFAM: regulatory protein, Crp; KEGG: ava:Ava_1750 possible transcriptional regulator, Crp/Fnr family. (256 aa)    
Predicted Functional Partners:
Tery_3155
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:all4963 adenylate cyclase carring two-component hybrid sensor and regulator domains.
 
 0.761
Tery_3392
KEGG: ava:Ava_3212 hypothetical protein.
  
 
   0.761
Tery_1337
FHA domain containing protein; KEGG: ana:all1730 similar to HetF protein.
  
     0.741
Tery_2693
TIGRFAM: eight transmembrane protein EpsH; KEGG: ana:all0497 unknown protein.
  
     0.737
Tery_4116
PHA accumulation regulator DNA-binding-like; PFAM: methylation; KEGG: ana:all1765 hypothetical protein.
  
     0.734
Tery_1600
KEGG: ana:all1164 hypothetical protein.
  
     0.731
Tery_4794
KEGG: ava:Ava_0442 hypothetical protein.
  
     0.730
Tery_4902
KEGG: ava:Ava_2898 hypothetical protein.
  
 
 
 0.677
Tery_0223
KEGG: ava:Ava_4381 hypothetical protein.
  
    0.672
Tery_1630
KEGG: ava:Ava_4182 surface antigen variable number.
  
     0.662
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.