STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3863PFAM: protein kinase GAF; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ava:Ava_0083 serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF sensor. (1932 aa)    
Predicted Functional Partners:
Tery_0615
PFAM: response regulator receiveR ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:all4496 two-component system sensory histidine kinase.
  
 
 0.913
Tery_0088
PFAM: Forkhead-associated protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ana:alr4954 serine/threonine kinase.
 
 
 0.830
Tery_4154
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ana:all0638 two-component hybrid sensor and regulator.
 
 
 0.808
Tery_4231
TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein response regulator receiver; KEGG: lic:LIC11444 response regulator.
    
 0.718
Tery_4781
PFAM: protein kinase TPR repeat Tetratricopeptide TPR_2; SMART: Serine/threonine protein kinase Tetratricopeptide region; KEGG: cyb:CYB_1515 tetratricopeptide repeat/protein kinase domain protein.
  
  
 0.693
Tery_0943
KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like Hpt PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
   
 0.670
Tery_3999
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiver; KEGG: bja:blr2288 two-component hybrid sensor and regulator.
 
 0.627
Tery_4980
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiveR PAS fold-3 PAS fold; SMART: PAS.
 
 
 0.627
Tery_2729
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ava:Ava_2148 multi-sensor hybrid histidine kinase.
 
 0.615
Tery_3155
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:all4963 adenylate cyclase carring two-component hybrid sensor and regulator domains.
 
 
 0.603
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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