STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3935KEGG: tde:TDE2520 hypothetical protein. (361 aa)    
Predicted Functional Partners:
Tery_0147
KEGG: tte:TTE2164 hypothetical protein.
  
     0.722
Tery_1730
Conserved hypothetical protein; KEGG: ana:alr3496 unknown protein.
  
     0.711
Tery_0300
Transcriptional activator, TenA family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family.
  
     0.527
Tery_2345
PFAM: glycoside hydrolase, family 57; KEGG: gvi:glr2625 hypothetical protein.
  
     0.512
Tery_1035
KEGG: ana:all5014 hypothetical protein.
  
     0.504
Tery_3201
PFAM: Insertion element protein; KEGG: gvi:gll0277 putative transposase.
  
     0.466
Tery_4273
KEGG: gvi:glr0616 hypothetical protein.
  
     0.464
Tery_3324
Conserved hypothetical protein; KEGG: ana:all4306 unknown protein.
  
     0.450
Tery_4393
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: rru:Rru_A1967 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.418
Tery_2072
PFAM: protein of unknown function DUF81; KEGG: sme:SMb20104 hypothetical membrane protein.
  
     0.413
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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