STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4318KEGG: ava:Ava_3509 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Tery_4380
PFAM: GCN5-related N-acetyltransferase; KEGG: ava:Ava_3803 GCN5-related N-acetyltransferase.
  
     0.775
Tery_3196
KEGG: ava:Ava_4227 hypothetical protein.
  
     0.774
Tery_4102
KEGG: ava:Ava_4879 hypothetical protein.
  
     0.774
Tery_0673
KEGG: ava:Ava_1261 hypothetical protein.
  
     0.773
Tery_2537
RNA-binding protein (contains KH domain)-like; KEGG: ana:alr1954 hypothetical protein.
  
     0.771
Tery_0919
KEGG: ana:all4144 hypothetical protein.
  
     0.769
Tery_3918
KEGG: syf:Synpcc7942_0293 hypothetical protein.
  
     0.768
Tery_1046
PFAM: protein of unknown function DUF1257; KEGG: ava:Ava_4766 protein of unknown function DUF1257.
  
     0.766
Tery_2273
PFAM: OstA-like protein; KEGG: syn:slr0250 hypothetical protein.
  
     0.766
Tery_0672
KEGG: ana:alr4308 hypothetical protein.
  
     0.763
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.