STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4360KEGG: syf:Synpcc7942_1632 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Tery_0628
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ava:Ava_3823 cytochrome c biogenesis protein, transmembrane region.
   
    0.596
Tery_3896
KEGG: ava:Ava_3439 beta-lactamase-like.
  
   0.526
Tery_4533
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.497
Tery_3948
TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase Domain of unknown function DUF1731; KEGG: ana:all2390 cell division inhibitor.
  
    0.490
Tery_2736
KEGG: ana:asl3851 hypothetical protein.
  
     0.457
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
  
  
 0.421
Tery_4980
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiveR PAS fold-3 PAS fold; SMART: PAS.
     
 0.417
Tery_0152
Hypothetical protein.
  
    0.414
Tery_2893
Beta-glucosidase; KEGG: syn:sll1538 beta-glucosidase.
  
     0.412
Tery_2626
KEGG: cyb:CYB_0377 hypothetical protein.
  
     0.407
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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