STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4540KEGG: syn:ssr2130 hypothetical protein. (65 aa)    
Predicted Functional Partners:
Tery_0761
KEGG: ava:Ava_2920 hypothetical protein.
  
     0.770
Tery_1767
KEGG: ana:asr2896 hypothetical protein.
  
     0.760
Tery_1575
KEGG: tel:tsr1787 hypothetical protein.
  
     0.690
Tery_4714
KEGG: ana:all4295 hypothetical protein.
  
     0.690
Tery_1910
KEGG: ava:Ava_0175 CAB/ELIP/HLIP-related protein.
  
     0.683
Tery_2796
KEGG: syf:Synpcc7942_0491 hypothetical protein.
  
     0.646
Tery_0198
KEGG: syn:slr1218 hypothetical protein.
  
     0.634
Tery_4881
PFAM: Heavy metal transport/detoxification protein; KEGG: syn:ssr2857 copper metallochaperone.
  
     0.608
Tery_3799
Glycerate kinase; KEGG: ana:alr2873 hypothetical protein.
  
     0.560
Tery_2576
KEGG: ava:Ava_0372 hypothetical protein.
  
     0.544
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.