STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4591PFAM: PAP fibrillin; KEGG: ana:alr4318 fibrillin. (194 aa)    
Predicted Functional Partners:
Tery_0912
PFAM: protein of unknown function DUF1350; KEGG: ava:Ava_3724 protein of unknown function DUF1350.
  
     0.774
Tery_2247
KEGG: syn:slr1702 hypothetical protein.
  
     0.774
Tery_4494
KEGG: ana:alr4810 hypothetical protein.
  
     0.774
Tery_1134
KEGG: ava:Ava_3446 hypothetical protein.
  
     0.771
Tery_4894
KEGG: ava:Ava_0784 hypothetical protein.
  
     0.771
Tery_1001
KEGG: ana:alr2749 hypothetical protein.
  
     0.770
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.770
Tery_4301
KEGG: ava:Ava_0555 hypothetical protein.
  
     0.768
Tery_4728
PFAM: protein of unknown function DUF1092; KEGG: ava:Ava_2159 protein of unknown function DUF1092.
  
     0.767
Tery_3917
PFAM: photosystem II manganese-stabilizing protein PsbO; KEGG: ana:all3854 manganese-stabilzing protein precursor.
  
     0.766
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.