STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4613KEGG: ana:all4724 hypothetical protein. (397 aa)    
Predicted Functional Partners:
Tery_4611
PFAM: metallophosphoesterase; KEGG: ana:alr1198 hypothetical protein.
 
     0.805
Tery_4612
Conserved hypothetical protein; KEGG: ana:alr1197 unknown protein.
      0.746
Tery_2045
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand; KEGG: syf:Synpcc7942_0131 cyclic nucleotide-binding domain (cNMP-BD) protein.
    
 
 0.718
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
   0.603
Tery_1616
KEGG: ana:all1841 hypothetical protein.
  
     0.601
Tery_1617
KEGG: cyb:CYB_0210 hypothetical protein.
  
     0.546
Tery_1619
KEGG: ana:all1838 putative multicomponent Na+:H+ antiporter subunit B.
  
     0.544
Tery_2472
KEGG: ana:alr0975 similar to phytochelatin synthase.
  
     0.495
Tery_3819
PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like Methyltransferase type 11 Methyltransferase type 12; KEGG: ana:alr2680 polyketide synthase.
  
  
 0.484
Tery_2787
PFAM: Ferritin and Dps; KEGG: ava:Ava_1762 ferritin and Dps.
  
     0.471
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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