STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4948Conserved hypothetical protein; KEGG: ana:all2511 unknown protein. (202 aa)    
Predicted Functional Partners:
Tery_4947
Transposase; KEGG: ana:alr4628 transposase.
       0.693
Tery_0194
Conserved hypothetical protein; KEGG: ana:asr4498 unknown protein.
  
     0.683
Tery_2736
KEGG: ana:asl3851 hypothetical protein.
  
     0.674
Tery_4285
KEGG: cya:CYA_0366 hypothetical protein.
  
     0.671
Tery_3391
PFAM: metallophosphoesterase; KEGG: ana:all2852 hypothetical protein.
  
     0.621
Tery_0622
Conserved hypothetical protein; KEGG: ana:asl0550 unknown protein.
  
     0.618
Tery_4161
Conserved hypothetical protein; KEGG: ana:alr2628 unknown protein.
  
     0.608
Tery_3439
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: pha:PSHAa0177 hypothetical protein.
  
     0.607
Tery_1886
KEGG: ava:Ava_4384 hypothetical protein.
  
     0.604
Tery_1607
KEGG: ana:alr1030 type IV pilus assembly protein PilO.
  
     0.563
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.