STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4959PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: ana:alr0963 unknown protein. (1544 aa)    
Predicted Functional Partners:
Tery_2810
Hypothetical protein; KEGG: ava:Ava_1356 NB-ARC.
  
     0.617
Tery_0492
KEGG: bfs:BF1471 hypothetical protein.
  
     0.608
Tery_0929
PFAM: PBS lyase HEAT-like repeat; KEGG: ava:Ava_2039 hypothetical protein.
  
     0.588
Tery_3770
KEGG: ava:Ava_1840 hypothetical protein.
  
     0.588
Tery_0709
Conserved hypothetical protein; KEGG: ana:alr7126 unknown protein.
  
     0.574
Tery_3771
PFAM: WD-40 repeat; KEGG: ava:Ava_1841 WD-40 repeat.
  
     0.571
Tery_3933
KEGG: ava:Ava_1557 hypothetical protein.
  
     0.562
Tery_3924
KEGG: ava:Ava_1557 hypothetical protein.
  
     0.516
Tery_2112
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: ana:all3274 UTP-glucose-1-phosphate uridylyltransferase.
  
     0.500
Tery_3205
Hypothetical protein.
  
     0.499
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.