STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4973PFAM: GUN4-like; KEGG: ana:alr4949 serine/threonine kinase. (338 aa)    
Predicted Functional Partners:
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.733
Tery_4640
PFAM: protein of unknown function DUF1230; KEGG: ava:Ava_0734 protein of unknown function DUF1230.
  
     0.723
Tery_1756
KEGG: ava:Ava_3374 hypothetical protein.
  
     0.703
Tery_1757
KEGG: syf:Synpcc7942_0921 hypothetical protein.
  
     0.696
psb28
PFAM: photosystem II protein PsbW, class I; KEGG: ana:all0801 photosystem II protein W; Belongs to the Psb28 family.
 
     0.647
Tery_0950
Hypothetical protein; KEGG: afu:AF2345m predicted DNA methylase containing a Zn-ribbon module.
  
     0.627
Tery_2579
Ferredoxin; KEGG: ava:Ava_2647 ferredoxin.
  
     0.603
Tery_3423
PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ana:all1919 serine/threonine kinase.
 
      0.600
Tery_2358
KEGG: ana:alr3645 similar to XisI protein.
  
     0.595
Tery_4709
KEGG: ana:alr3414 hypothetical protein.
  
     0.584
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.