Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tery_5000PFAM: phosphonate metabolism PhnJ; KEGG: tcx:Tcr_2085 phosphonate metabolism PhnJ. (315 aa)    
Predicted Functional Partners:
Tery_4999
PFAM: phosphonate metabolism; KEGG: tbd:Tbd_2294 phosphonate metabolism protein.
 
 0.999
Tery_5001
PFAM: ABC transporter related; SMART: ATPase; KEGG: tbd:Tbd_2292 ABC phosphonate transport system ATPase.
 0.999
Tery_4998
KEGG: tbd:Tbd_2295 putative PhnH protein, phosphonate metabolism, function unknown.
 
 0.998
Tery_5002
Phosphonate C-P lyase system protein PhnL; KEGG: tbd:Tbd_2291 ABC phosphonate transport system ATPase; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: ATPase.
 
 
 0.998
Tery_4997
KEGG: tbd:Tbd_2296 putative phosphonate metabolism protein PhnG; K06166 PhnG protein.
  
 0.996
Tery_5003
TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase Amidohydrolase 3; KEGG: tbd:Tbd_2290 amidohydrolase-like protein.
 
 
 0.995
phnC2
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.846
Tery_0366
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ana:all8089 putative phosphonate transport system substrate-binding protein.
  
  
 0.753
Tery_4153
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ana:alr2738 putative phosphonate transport system substrate-binding protein.
  
  
 0.753
Tery_4993
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tbd:Tbd_2300 phosphonate-binding periplasmic protein.
 
  
 0.729
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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