STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_5007Hypothetical protein; KEGG: ava:Ava_3528 peptidoglycan-binding domain 1. (398 aa)    
Predicted Functional Partners:
Tery_2693
TIGRFAM: eight transmembrane protein EpsH; KEGG: ana:all0497 unknown protein.
  
     0.773
Tery_4794
KEGG: ava:Ava_0442 hypothetical protein.
  
     0.773
Tery_2457
KEGG: ava:Ava_3754 hypothetical protein.
  
     0.769
Tery_4219
KEGG: ava:Ava_3525 heterocyst differentiation protein.
  
     0.767
Tery_2219
Conserved hypothetical protein; KEGG: ana:all3516 unknown protein.
  
     0.762
Tery_1097
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_1366 glycosyl transferase, family 2.
  
     0.751
Tery_1469
Conserved hypothetical protein; KEGG: ana:all0311 unknown protein.
  
     0.743
Tery_2012
KEGG: ava:Ava_3611 peptidase C14, caspase catalytic subunit P20.
  
     0.740
Tery_2309
KEGG: ava:Ava_4409 hypothetical protein.
  
     0.737
Tery_3392
KEGG: ava:Ava_3212 hypothetical protein.
  
     0.726
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.