STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_5023Multicopper oxidase, type 2; PFAM: Hemolysin-type calcium-binding region multicopper oxidase, type 2 multicopper oxidase, type 3; KEGG: ana:alr0791 outer membrane secretion protein. (1346 aa)    
Predicted Functional Partners:
Tery_1355
PFAM: Hemolysin-type calcium-binding region; KEGG: sil:SPO3673 type I secretion target repeat protein.
  
     0.775
Tery_0803
Hypothetical protein; KEGG: sil:SPO3673 type I secretion target repeat protein.
  
     0.771
Tery_2563
TIGRFAM: plastocyanin; PFAM: blue (type 1) copper domain; KEGG: ava:Ava_2745 plastocyanin precursor.
   
 
 0.732
Tery_0623
PFAM: secretion protein HlyD; KEGG: syf:Synpcc7942_1132 hypothetical protein.
 
    0.598
Tery_2729
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ava:Ava_2148 multi-sensor hybrid histidine kinase.
  
 
 0.575
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
  
 
 0.564
Tery_0100
PFAM: Na-Ca exchanger/integrin-beta4; SMART: Peptidase, metallopeptidases; KEGG: ava:Ava_4725 polymorphic membrane protein.
 
 
 0.543
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.538
Tery_1352
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; KEGG: ana:all7315 ABC transporter ATP-binding protein, hemolysin secretion protein; TIGRFAM: type I secretion system ATPase; PFAM: cyclic nucleotide-binding ABC transporter, transmembrane region ABC transporter related peptidase C39, bacteriocin processing; SMART: ATPase.
 
  
 0.522
Tery_4420
KEGG: syw:SYNW0985 hypothetical protein.
 
 
 0.514
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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