STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TWT_234Unknown. (143 aa)    
Predicted Functional Partners:
pknB
Serine/threonine-protein kinase.
 
 
 
 0.999
TWT_778
Probable serine/threonine protein kinase.
 
 
 
 0.999
pknA
Serine/threonine-protein kinase.
  
 
 
 0.934
TWT_235
Unknown.
 
    0.891
TWT_236
Unknown.
 
     0.794
TWT_772
Unknown.
  
     0.768
TWT_774
Unknown.
  
     0.765
ponA
Penicillin-binding protein 1.
   
 
 0.734
TWT_232
Unknown.
       0.732
TWT_233
Unknown.
       0.732
Your Current Organism:
Tropheryma whipplei
NCBI taxonomy Id: 203267
Other names: T. whipplei str. Twist, Tropheryma whipplei Twist, Tropheryma whipplei str. Twist, Tropheryma whipplei strain Twist
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.