STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFO_0282Hypothetical protein. (223 aa)    
Predicted Functional Partners:
BFO_1227
DNA binding domain protein, excisionase family; Identified by match to protein family HMM TIGR01764.
  
     0.644
BFO_1235
Elongation factor Tu GTP binding domain protein; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764.
  
   
 0.615
BFO_2997
Hypothetical protein.
 
     0.594
BFO_1234
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
    0.592
trmB
Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.578
BFO_0874
Hypothetical protein.
  
     0.521
BFO_0625
Hypothetical protein.
  
     0.471
BFO_3270
Hypothetical protein; Overlaps another CDS with the same product name.
 
     0.456
BFO_0627
Hypothetical protein.
  
     0.454
BFO_0056
Hypothetical protein.
  
     0.445
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.