STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFO_0750Hypothetical protein; Identified by glimmer; putative. (40 aa)    
Predicted Functional Partners:
BFO_0751
Hypothetical protein; Identified by glimmer; putative.
       0.625
BFO_0749
Hypothetical protein; Identified by glimmer; putative.
       0.550
BFO_0752
K+-dependent Na+/Ca+ exchanger family protein; Identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367.
       0.469
BFO_0753
Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.
       0.469
BFO_0754
Peptidase, M23 family; Identified by match to protein family HMM PF01551.
       0.469
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.