STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFO_0812Outer membrane efflux protein; Identified by match to protein family HMM PF02321. (503 aa)    
Predicted Functional Partners:
BFO_0811
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.987
BFO_0810
Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.964
BFO_0809
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.920
BFO_0158
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
  
  0.914
BFO_0388
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
  
 
0.910
BFO_0459
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
     
  0.900
BFO_1288
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
     
  0.900
BFO_2792
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
     
  0.900
BFO_3102
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
     
  0.900
BFO_0814
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    0.890
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.