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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFO_1069Hypothetical protein. (311 aa)    
Predicted Functional Partners:
BFO_1068
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
  
    0.784
fabHA_2
Beta-ketoacyl-acyl-carrier-protein synthase III; Identified by match to protein family HMM PF08541; match to protein family HMM PF08545.
       0.533
BFO_1074
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993.
  
  
 0.533
BFO_1075
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.
       0.527
BFO_1072
Hypothetical protein.
       0.525
BFO_1073
Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
     
 0.518
BFO_1071
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.
  
    0.514
BFO_1076
Hypothetical protein.
       0.514
BFO_1077
Oxidoreductase, NAD-binding domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447.
       0.485
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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