Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BFO_1982Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; Belongs to the glycosyl hydrolase 13 family. (831 aa)    
Predicted Functional Partners:
BFO_0320
Starch synthase catalytic domain protein; Identified by match to protein family HMM PF08323.
 
  
 0.767
BFO_0171
Putative glycogen debranching enzyme; Identified by match to protein family HMM PF06202.
  
 
 0.752
BFO_2270
Identified by match to protein family HMM PF07980.
 
     0.752
glgP
Alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
 
 
 0.693
BFO_2271
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR04056; match to protein family HMM TIGR04057.
  
     0.641
BFO_2272
Hypothetical protein.
 
     0.597
BFO_2501
Putative 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446.
 
  
 0.577
BFO_1983
Hypothetical protein.
       0.569
BFO_0466
Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; match to protein family HMM PF09087; Belongs to the glycosyl hydrolase 13 family.
 
  
0.556
BFO_2268
Hypothetical protein.
 
   
 0.536
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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