Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BFO_2007ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. (511 aa)    
Predicted Functional Partners:
rprY
Transcriptional regulatory protein RprY; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.950
BFO_1221
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
0.933
BFO_0894
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
  
 
0.927
BFO_0895
Putative transcriptional regulatory protein RprY; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.814
BFO_1220
Putative transcriptional regulatory protein afsQ1; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.790
BFO_1922
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF00515; match to protein family HMM PF02518.
 
 
0.650
BFO_2853
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
0.646
BFO_0487
Hypothetical protein.
 
     0.544
BFO_2116
TrkA C-terminal domain protein; Identified by match to protein family HMM PF00999; match to protein family HMM PF02080.
 
  
 0.484
BFO_1523
Phosphotransferase enzyme family; Identified by match to protein family HMM PF01636.
 
     0.460
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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