STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFO_2873Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (400 aa)    
Predicted Functional Partners:
BFO_1214
Putative lipoprotein.
  
     0.754
BFO_0843
Hypothetical protein.
  
     0.749
BFO_0423
Outer membrane insertion signal domain protein; Identified by match to protein family HMM PF03349.
  
     0.741
BFO_2831
Hypothetical protein.
  
     0.741
BFO_0012
Hypothetical protein.
  
     0.735
BFO_0321
Putative lipoprotein.
  
     0.729
BFO_1442
Putative lipoprotein.
 
     0.723
gldL
Gliding motility-associated protein GldL; Identified by match to protein family HMM TIGR03513.
  
     0.720
BFO_2870
Putative lipoprotein.
 
     0.717
BFO_0024
Hypothetical protein.
  
    0.716
Your Current Organism:
Tannerella forsythia
NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.