BFO_3340 protein (Tannerella forsythia) - STRING interaction network

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Score

BFO_3340

3'-5' exonuclease; Identified by match to protein family HMM PF01612. (198 aa)

Predicted Functional Partners:

rnr

0.965

rpsA

0.901

rpsD

0.895

rpsK

0.888

BFO_3341

0.841

BFO_3339

0.817

fabD

0.794

BFO_3338

0.780

ksgA

0.767

BFO_0669

0.748

Your Current Organism:

Tannerella forsythia

NCBI taxonomy Id: 203275
Other names: T. forsythia 92A2, Tannerella forsythia 92A2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BFO_0669	BFO_3340	BFO_0669	BFO_3340	Hypothetical protein.	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	0.748
BFO_0669	BFO_3341	BFO_0669	BFO_3341	Hypothetical protein.	Hypothetical protein.	0.484
BFO_3338	BFO_3339	BFO_3338	BFO_3339	Identified by match to protein family HMM PF00132.	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	0.780
BFO_3338	BFO_3340	BFO_3338	BFO_3340	Identified by match to protein family HMM PF00132.	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	0.780
BFO_3338	BFO_3341	BFO_3338	BFO_3341	Identified by match to protein family HMM PF00132.	Hypothetical protein.	0.780
BFO_3338	fabD	BFO_3338	BFO_3342	Identified by match to protein family HMM PF00132.	[acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.	0.782
BFO_3339	BFO_3338	BFO_3339	BFO_3338	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	Identified by match to protein family HMM PF00132.	0.780
BFO_3339	BFO_3340	BFO_3339	BFO_3340	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	0.817
BFO_3339	BFO_3341	BFO_3339	BFO_3341	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	Hypothetical protein.	0.817
BFO_3339	fabD	BFO_3339	BFO_3342	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	[acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.	0.780
BFO_3340	BFO_0669	BFO_3340	BFO_0669	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Hypothetical protein.	0.748
BFO_3340	BFO_3338	BFO_3340	BFO_3338	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Identified by match to protein family HMM PF00132.	0.780
BFO_3340	BFO_3339	BFO_3340	BFO_3339	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Putative 23S rRNA m5C1962 methyltransferase; Identified by match to protein family HMM PF02475.	0.817
BFO_3340	BFO_3341	BFO_3340	BFO_3341	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Hypothetical protein.	0.841
BFO_3340	fabD	BFO_3340	BFO_3342	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	[acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.	0.794
BFO_3340	ksgA	BFO_3340	BFO_1391	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.767
BFO_3340	rnr	BFO_3340	BFO_0707	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.965
BFO_3340	rpsA	BFO_3340	BFO_1780	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.901
BFO_3340	rpsD	BFO_3340	BFO_1572	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.895
BFO_3340	rpsK	BFO_3340	BFO_1571	3'-5' exonuclease; Identified by match to protein family HMM PF01612.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.888