Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KIQ03947.1 | KIQ06119.1 | RU06_13810 | RU06_12305 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KIQ03947.1 | atpD | RU06_13810 | RU06_15680 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.950 |
| KIQ03947.1 | lgt | RU06_13810 | RU06_13815 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.685 |
| KIQ03947.1 | recA | RU06_13810 | RU06_06390 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.950 |
| KIQ03947.1 | trpA | RU06_13810 | RU06_13820 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.761 |
| KIQ03947.1 | trpB | RU06_13810 | RU06_13825 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.982 |
| KIQ03947.1 | trpC | RU06_13810 | RU06_13830 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. | 0.569 |
| KIQ03947.1 | trpD | RU06_13810 | RU06_01530 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.419 |
| KIQ03947.1 | trpE | RU06_13810 | RU06_13845 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate synthase; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia. | 0.473 |
| KIQ06119.1 | KIQ03947.1 | RU06_12305 | RU06_13810 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KIQ06119.1 | atpD | RU06_12305 | RU06_15680 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.950 |
| KIQ06119.1 | lgt | RU06_12305 | RU06_13815 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.457 |
| KIQ06119.1 | recA | RU06_12305 | RU06_06390 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.950 |
| KIQ06119.1 | trpA | RU06_12305 | RU06_13820 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.663 |
| KIQ06119.1 | trpB | RU06_12305 | RU06_13825 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.975 |
| KIQ06119.1 | trpC | RU06_12305 | RU06_13830 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. | 0.457 |
| KIQ06119.1 | trpD | RU06_12305 | RU06_01530 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.419 |
| KIQ06119.1 | trpE | RU06_12305 | RU06_13845 | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate synthase; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia. | 0.473 |
| atpD | KIQ03947.1 | RU06_15680 | RU06_13810 | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
| atpD | KIQ06119.1 | RU06_15680 | RU06_12305 | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | GltA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
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