STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR23172.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
KTR23174.1
4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.954
KTR23173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
KTR23171.1
2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
KTR23165.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
KTR23247.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.656
KTR25287.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.507
KTR19484.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.478
KTR24517.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.451
KTR23175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
Your Current Organism:
Curtobacterium citreum
NCBI taxonomy Id: 2036
Other names: ATCC 15828, Brevibacterium citreum, C. citreum, CCUG 12163, CCUG 28999, CIP 81.26, Curtibacterium citreum, DSM 20528, IFO 12677, LMG 8786, LMG:8786, NBRC 12677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.