Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KTR03596.1 | KTR21063.1 | NS330_16190 | NS330_05455 | Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
KTR06257.1 | KTR21063.1 | NS330_15530 | NS330_05455 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.454 |
KTR21063.1 | KTR03596.1 | NS330_05455 | NS330_16190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
KTR21063.1 | KTR06257.1 | NS330_05455 | NS330_15530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.454 |
KTR21063.1 | KTR21064.1 | NS330_05455 | NS330_05460 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Na+/galactose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.947 |
KTR21063.1 | aroQ | NS330_05455 | NS330_05465 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.485 |
KTR21064.1 | KTR21063.1 | NS330_05460 | NS330_05455 | Na+/galactose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
KTR21064.1 | aroQ | NS330_05460 | NS330_05465 | Na+/galactose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.535 |
aroQ | KTR21063.1 | NS330_05465 | NS330_05455 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
aroQ | KTR21064.1 | NS330_05465 | NS330_05460 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Na+/galactose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.535 |