STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR19456.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
KTR02474.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.803
KTR19457.1
ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
KTR14749.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.730
KTR21171.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.699
KTR14820.1
GltA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.692
KTR14156.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.692
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.622
KTR21168.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
 0.581
KTR11928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.581
KTR05360.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.580
Your Current Organism:
Curtobacterium citreum
NCBI taxonomy Id: 2036
Other names: ATCC 15828, Brevibacterium citreum, C. citreum, CCUG 12163, CCUG 28999, CIP 81.26, Curtibacterium citreum, DSM 20528, IFO 12677, LMG 8786, LMG:8786, NBRC 12677
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