Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KTR19486.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
KTR24094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.810
KTR19484.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
KTR19488.1
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.652
KTR19485.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.641
pat
Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
       0.572
KTR19512.1
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
KTR19489.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
Your Current Organism:
Curtobacterium citreum
NCBI taxonomy Id: 2036
Other names: ATCC 15828, Brevibacterium citreum, C. citreum, CCUG 12163, CCUG 28999, CIP 81.26, Curtibacterium citreum, DSM 20528, IFO 12677, LMG 8786, LMG:8786, NBRC 12677
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