STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR15197.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
KTR25080.1
5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
  
 0.935
KTR25110.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.851
KTR02476.1
Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.699
KTR25109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.698
KTR14860.1
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.671
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.658
KTR10431.1
Spermine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.639
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.625
KTR07273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.619
rihB
Ribonucleoside hydrolase; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.618
Your Current Organism:
Curtobacterium citreum
NCBI taxonomy Id: 2036
Other names: ATCC 15828, Brevibacterium citreum, C. citreum, CCUG 12163, CCUG 28999, CIP 81.26, Curtibacterium citreum, DSM 20528, IFO 12677, LMG 8786, LMG:8786, NBRC 12677
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