STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR12348.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (809 aa)    
Predicted Functional Partners:
KTR24515.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.726
KTR12775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
  
  
 0.726
KTR24848.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
    
 0.722
KTR08900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
  
  
 0.721
KTR04403.1
Glycosyl hydrolase family 32; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.665
KTR19472.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.661
KTR16175.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.661
KTR16170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.659
KTR24088.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.627
KTR11857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.544
Your Current Organism:
Curtobacterium citreum
NCBI taxonomy Id: 2036
Other names: ATCC 15828, Brevibacterium citreum, C. citreum, CCUG 12163, CCUG 28999, CIP 81.26, Curtibacterium citreum, DSM 20528, IFO 12677, LMG 8786, LMG:8786, NBRC 12677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.