STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CP533_0988RPOL4c domain-containing protein. (142 aa)    
Predicted Functional Partners:
CP533_0299
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
CP533_0447
RPOLD domain-containing protein.
    
 0.999
CP533_0944
Uncharacterized protein.
    
 0.999
CP533_4019
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
CP533_2870
Uncharacterized protein.
   
 0.999
CP533_4111
Uncharacterized protein.
   
 0.999
CP533_5315
Uncharacterized protein.
   
 0.999
CP533_5091
RNA_pol_L_2 domain-containing protein.
   
 0.999
CP533_1184
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
CP533_1769
Uncharacterized protein.
   
 0.999
Your Current Organism:
Ophiocordyceps sp. camponotisaundersi
NCBI taxonomy Id: 2039874
Other names: O. sp. 'camponoti-saundersi', Ophiocordyceps camponoti-saundersi Kobmoo, Mongkols., Tasanathai, Thanakitp. & Luangsa-ard, nom. inval., Ophiocordyceps sp. 'camponoti-saundersi'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.