STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX03644.1Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)    
Predicted Functional Partners:
ALX06222.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.925
ALX05003.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.902
ALX05800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.665
gabD2
NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.599
ALX05140.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.560
ALX03642.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
     
 0.546
ALX05338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.490
ALX03485.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.483
ALX04025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.483
ALX05438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.483
Your Current Organism:
Aeromicrobium erythreum
NCBI taxonomy Id: 2041
Other names: A. erythreum, ATCC 51598, DSM 8599, JCM 8359, LMG 16472, LMG:16472, NBRC 15406, NRRL B-3381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.