ALX03985.1 protein (Aeromicrobium erythreum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Aeromicrobium erythreum

NCBI taxonomy Id: 2041
Other names: A. erythreum, ATCC 51598, DSM 8599, JCM 8359, LMG 16472, LMG:16472, NBRC 15406, NRRL B-3381

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALX03355.1	ALX03984.1	AERYTH_00885	AERYTH_04350	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
ALX03355.1	ALX03985.1	AERYTH_00885	AERYTH_04355	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
ALX03355.1	ALX06076.1	AERYTH_00885	AERYTH_15910	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	EryAIII acyl transferase domain in polyketide synthase (PKS).	0.431
ALX03355.1	ALX06215.1	AERYTH_00885	AERYTH_16690	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
ALX03355.1	eryAII	AERYTH_00885	AERYTH_15915	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	EryAII acyl transferase domain in polyketide synthase (PKS); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
ALX03479.1	ALX03985.1	AERYTH_01595	AERYTH_04355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
ALX03479.1	ALX06076.1	AERYTH_01595	AERYTH_15910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	EryAIII acyl transferase domain in polyketide synthase (PKS).	0.482
ALX03677.1	ALX03980.1	AERYTH_02650	AERYTH_04330	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
ALX03677.1	ALX03985.1	AERYTH_02650	AERYTH_04355	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ALX03677.1	ALX06076.1	AERYTH_02650	AERYTH_15910	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	EryAIII acyl transferase domain in polyketide synthase (PKS).	0.690
ALX03677.1	ALX06215.1	AERYTH_02650	AERYTH_16690	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ALX03677.1	eryAII	AERYTH_02650	AERYTH_15915	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	EryAII acyl transferase domain in polyketide synthase (PKS); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
ALX03677.1	fabG	AERYTH_02650	AERYTH_09530	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
ALX03978.1	ALX03980.1	AERYTH_04320	AERYTH_04330	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
ALX03978.1	ALX03985.1	AERYTH_04320	AERYTH_04355	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
ALX03978.1	ALX06215.1	AERYTH_04320	AERYTH_16690	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALX03980.1	ALX03677.1	AERYTH_04330	AERYTH_02650	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
ALX03980.1	ALX03978.1	AERYTH_04330	AERYTH_04320	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.839
ALX03980.1	ALX03984.1	AERYTH_04330	AERYTH_04350	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
ALX03980.1	ALX03985.1	AERYTH_04330	AERYTH_04355	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981