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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX04696.1Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
ALX04695.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
ALX04697.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.853
ALX05318.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.649
ALX04693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
ALX04705.1
rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.550
ALX04279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.495
ALX04698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.493
ALX03766.1
uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.424
ALX03995.1
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.416
ALX05931.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.405
Your Current Organism:
Aeromicrobium erythreum
NCBI taxonomy Id: 2041
Other names: A. erythreum, ATCC 51598, DSM 8599, JCM 8359, LMG 16472, LMG:16472, NBRC 15406, NRRL B-3381
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