ALX05171.1 protein (Aeromicrobium erythreum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Aeromicrobium erythreum

NCBI taxonomy Id: 2041
Other names: A. erythreum, ATCC 51598, DSM 8599, JCM 8359, LMG 16472, LMG:16472, NBRC 15406, NRRL B-3381

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALX05167.1	ALX05168.1	AERYTH_10865	AERYTH_10870	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
ALX05167.1	ALX05170.1	AERYTH_10865	AERYTH_10880	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05167.1	ALX05171.1	AERYTH_10865	AERYTH_10885	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.499
ALX05167.1	lipA	AERYTH_10865	AERYTH_10875	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.558
ALX05168.1	ALX05167.1	AERYTH_10870	AERYTH_10865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
ALX05168.1	ALX05170.1	AERYTH_10870	AERYTH_10880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05168.1	ALX05171.1	AERYTH_10870	AERYTH_10885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.499
ALX05168.1	lipA	AERYTH_10870	AERYTH_10875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.543
ALX05170.1	ALX05167.1	AERYTH_10880	AERYTH_10865	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05170.1	ALX05168.1	AERYTH_10880	AERYTH_10870	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05170.1	ALX05171.1	AERYTH_10880	AERYTH_10885	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
ALX05170.1	lipA	AERYTH_10880	AERYTH_10875	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.778
ALX05171.1	ALX05167.1	AERYTH_10885	AERYTH_10865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05171.1	ALX05168.1	AERYTH_10885	AERYTH_10870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALX05171.1	ALX05170.1	AERYTH_10885	AERYTH_10880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ALX05171.1	lipA	AERYTH_10885	AERYTH_10875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.705
lipA	ALX05167.1	AERYTH_10875	AERYTH_10865	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
lipA	ALX05168.1	AERYTH_10875	AERYTH_10870	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543
lipA	ALX05170.1	AERYTH_10875	AERYTH_10880	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
lipA	ALX05171.1	AERYTH_10875	AERYTH_10885	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.705