STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX05286.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
ALX05287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.639
ALX05924.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.552
ALX06271.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
  
  
 0.520
ALX03910.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
  
  
 0.451
ALX04118.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.451
ALX05285.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.425
ALX03202.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.422
ALX03901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.422
ALX06284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.422
Your Current Organism:
Aeromicrobium erythreum
NCBI taxonomy Id: 2041
Other names: A. erythreum, ATCC 51598, DSM 8599, JCM 8359, LMG 16472, LMG:16472, NBRC 15406, NRRL B-3381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.